Package: qtl2bioc 0.22

Karl W Broman

qtl2bioc: Connect to Bioconductor for QTL Experiments

Functions to connect to genome databases via Bioconductor, such as to obtain gene annotation information. Part of R/qtl2, a reimplementation of the R/qtl package to better handle high-dimensional data and complex cross designs.

Authors:Karl W Broman [aut, cre]

qtl2bioc_0.22.tar.gz
qtl2bioc_0.22.zip(r-4.7)qtl2bioc_0.22.zip(r-4.6)qtl2bioc_0.22.zip(r-4.5)
qtl2bioc_0.22.tgz(r-4.6-any)qtl2bioc_0.22.tgz(r-4.5-any)
qtl2bioc_0.22.tar.gz(r-4.7-any)qtl2bioc_0.22.tar.gz(r-4.6-any)
qtl2bioc_0.22.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
qtl2bioc/json (API)
NEWS

# Install 'qtl2bioc' in R:
install.packages('qtl2bioc', repos = c('https://rqtl.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/rqtl/qtl2bioc/issues

On CRAN:

Conda:

1.70 score 1 stars 2 exports 57 dependencies

Last updated from:cc4962fbe5. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK189
source / vignettesOK262
linux-release-x86_64OK215
macos-release-arm64OK132
macos-oldrel-arm64OK130
windows-develOK149
windows-releaseOK124
windows-oldrelOK169
wasm-releaseOK132

Exports:create_ensembl_query_funcgrab_ensembl

Dependencies:AnnotationDbiAnnotationHubaskpassBiobaseBiocBaseUtilsBiocFileCacheBiocGenericsBiocManagerBiocVersionBiostringsbitbit64blobcachemclicpp11crayoncurlDBIdbplyrdplyrfastmapfilelockgenericsGenomicRangesgluehttrhttr2IRangesjsonliteKEGGRESTlifecyclemagrittrmemoisemimeopensslpillarpkgconfigpngpurrrR6rappdirsrlangRSQLiteS4VectorsSeqinfostringistringrsystibbletidyrtidyselectutf8vctrswithrXVectoryaml