Package: qtl2bioc 0.23-1

Karl W Broman

qtl2bioc: Connect to Bioconductor for QTL Experiments

Functions to connect to genome databases via Bioconductor, such as to obtain gene annotation information. Part of R/qtl2, a reimplementation of the R/qtl package to better handle high-dimensional data and complex cross designs.

Authors:Karl W Broman [aut, cre]

qtl2bioc_0.23-1.tar.gz
qtl2bioc_0.23-1.zip(r-4.7-any)qtl2bioc_0.23-1.zip(r-4.6-any)qtl2bioc_0.23-1.zip(r-4.5-any)
qtl2bioc_0.23-1.tgz(r-4.6-any)qtl2bioc_0.23-1.tgz(r-4.5-any)
qtl2bioc_0.23-1.tar.gz(r-4.7-any)qtl2bioc_0.23-1.tar.gz(r-4.6-any)
qtl2bioc_0.23-1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
qtl2bioc/json (API)

# Install 'qtl2bioc' in R:
install.packages('qtl2bioc', repos = c('https://rqtl.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/rqtl/qtl2bioc/issues

On CRAN:

Conda:

2.18 score 1 stars 2 exports 57 dependencies

Last updated from:ed6c608cf2. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK208
source / vignettesOK301
linux-releaseOK204
macos-releaseOK233
macos-oldrelOK260
windows-develOK149
windows-releaseOK139
windows-oldrelOK135
wasm-releaseOK110

Exports:create_ensembl_query_funcgrab_ensembl

Dependencies:AnnotationDbiAnnotationHubaskpassBiobaseBiocBaseUtilsBiocFileCacheBiocGenericsBiocManagerBiocVersionBiostringsbitbit64blobcachemclicpp11crayoncurlDBIdbplyrdplyrfastmapfilelockgenericsGenomicRangesgluehttrhttr2IRangesjsonliteKEGGRESTlifecyclemagrittrmemoisemimeopensslpillarpkgconfigpngpurrrR6rappdirsrlangRSQLiteS4VectorsSeqinfostringistringrsystibbletidyrtidyselectutf8vctrswithrXVectoryaml