Package: GNapi 0.3-8
Karl W Broman
GNapi: Connection to the GeneNetwork API
Tools for connecting to the GeneNetwork API.
Authors:
GNapi_0.3-8.tar.gz
GNapi_0.3-8.zip(r-4.7)GNapi_0.3-8.zip(r-4.6)GNapi_0.3-8.zip(r-4.5)
GNapi_0.3-8.tgz(r-4.6-any)GNapi_0.3-8.tgz(r-4.5-any)
GNapi_0.3-8.tar.gz(r-4.7-any)GNapi_0.3-8.tar.gz(r-4.6-any)
GNapi_0.3-8.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
GNapi/json (API)
NEWS
| # Install 'GNapi' in R: |
| install.packages('GNapi', repos = c('https://rqtl.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/rqtl/gnapi/issues
Last updated from:b6150c2c1d. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 473 | ||
| source / vignettes | OK | 189 | ||
| linux-release-x86_64 | OK | 170 | ||
| macos-release-arm64 | OK | 142 | ||
| macos-oldrel-arm64 | OK | 119 | ||
| windows-devel | OK | 121 | ||
| windows-release | OK | 118 | ||
| windows-oldrel | OK | 110 | ||
| wasm-release | OK | 119 |
Exports:check_gnget_genoget_phenognapi_urlinfo_phenolist_datasetslist_groupslist_speciesrun_correlationrun_gemmarun_rqtl
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Check if GeneNetwork is live | check_gn |
| Get genotype data | get_geno |
| Get phenotype data | get_pheno |
| The URL for the GeneNetwork API | gnapi_url |
| Get summary information about a phenotype | info_pheno |
| List available datasets for a group | list_datasets |
| Get list of groups | list_groups |
| Get list of species | list_species |
| Calculate correlations | run_correlation |
| Run gemma | run_gemma |
| Run R/qtl | run_rqtl |
